Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model

Haiqiang Zhang; Yong Li; Cheng Xiang

doi:10.3788/LOP222411

Journals >Laser & Optoelectronics Progress >Volume 60 >Issue 16 >Page 1617001 > Article

Laser & Optoelectronics Progress
Vol. 60, Issue 16, 1617001 (2023)

Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model

Haiqiang Zhang¹, Yong Li^1,*, and Cheng Xiang²

Author Affiliations

¹Faculty of Information Engineering and Automation, Kunming University of Science and Technology, Kunming 650550, Yunnan, China

²Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650550, Yunnan, China

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DOI: 10.3788/LOP222411 Cite this Article Set citation alerts

Haiqiang Zhang, Yong Li, Cheng Xiang. Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model[J]. Laser & Optoelectronics Progress, 2023, 60(16): 1617001 Copy Citation Text

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Fig. 1. Analysis of mass spectrometry data based on Flex-Bootstrap and neural network fusion model

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Fig. 2. Flow chart of CNN and DNN fusion model

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Fig. 3. Flow chart of Multi-CNN and DNN fusion model

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Fig. 4. Accuracy and loss function curve

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Model	DNN	CNN and DNN fusion	Multi-CNN and DNN fusion
Accuracy（Lr is 0.001）	83.75	85.42	90.71
Accuracy（Lr is 0.0001）	89.52	92.27	98.82

Table 1. Accuracy of each model in different Lr

Haiqiang Zhang, Yong Li, Cheng Xiang. Analysis of Protein Mass Spectrometry Data using Flex-Bootstrap and Neural Network Fusion Model[J]. Laser & Optoelectronics Progress, 2023, 60(16): 1617001

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