Heterogeneous nascent particles were observed in a pilot product of polypropylene in-reactor alloy, which was polymerized by Ziegler-Natta/Metallocene hybrid catalyst using Spheripol technology. Most of the particles in the product are translucent, and opaque particles were observed as well. The differences in morphology, composition, chain structure, thermal properties and mechanical properties between these two kinds of particles were investigated by Fourier transform infrared spectroscopy (FTIR), nuclear magnetic resonance (NMR), scanning electron microscopy (SEM), polarized optical microscopy (POM), and differential scanning calorimetry (DSC) techniques. The results of FTIR, NMR and SEM indicate that different morphology of these two different particles is caused by different content of ethylene-propylene copolymers. The results of DSC and POM showed that the translucent particles has higher crystallization rate than opaque particles due to the presence of ethylene-propylene copolymers. The mechanical properties results showed that the impact resistance property of opaque particles is obviously lower than that of translucent particles, while its tensile strength and bending modulus are much higher than that of translucent particles. Based on the process of Spheripol technology, a preliminary explanation for the formation of different nascent PP in-reactor alloy particles is proposed.